miRBase entry: gga-mir-206

Stem-loop gga-mir-206


Accession
MI0001207
Description
Gallus gallus gga-mir-206 precursor miRNA
Gene family
MIPF0000038; mir-1

Literature search
20 open access papers mention gga-mir-206
(184 sentences)

Sequence

606 reads, 62 reads per million, 5 experiments
gagaugacaugcuucuuuauauccccauauggauuaggcugcuaUGGAAUGUAAGGAAGUGUGUGGuuucagggag
(((((.((((((((((((((((..((((((((......))).))))).)))))))))))))))).)))))......

Structure
------     g                cc     -   au 
      gagau acaugcuucuuuauau  ccaua ugg  u
      ||||| ||||||||||||||||  ||||| |||   
      cuuuG UGUGUGAAGGAAUGUA  GGUau guc  a
gaggga     G                -A     c   gg 


Annotation confidence Not enough data
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Comments
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
chr3: 108045182-108045257 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-206

Accession MIMAT0001139
Description Gallus gallus gga-miR-206 mature miRNA
Sequence 45 - UGGAAUGUAAGGAAGUGUGUGG - 66
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716