Stem-loop gga-mir-223

Accession

MI0001208

Description

Gallus gallus gga-mir-223 precursor miRNA mir-223

Gene
family

RF00664; mir-223

Literature search

62 open access papers mention gga-mir-223
(252 sentences)

Sequence

1123747 reads, 588.0 reads per million, 259 experiments

cugcagugcagcacugCGUGUAUUUGACAAGCUGAGUUUGACACUcagucuggcagagUGUCAGUUUGUCAAAUACCCCAAgugaggcacuugcugagca
..(((((((..((((....((((((((((((((......(((((((.((...)).)))))))))))))))))))))....))))..)))).)))......

Structure

----cu   -    ag    gCGU              GAGUUU       a  c 
      gca gugc  cacu    GUAUUUGACAAGCU      GACACUc gu  
      ||| ||||  ||||    ||||||||||||||      ||||||| || u
      cgu cacg  gugA    CAUAAACUGUUUGA      CUGUgag cg  
acgagu   u    ga    ACCC              ------       a  g 

Annotation confidence High

Genome context

4: 221057-221156 [+]

Mature gga-miR-223-5p

• Accession: MIMAT0051208
• Description: Gallus gallus gga-miR-223-5p mature miRNA
• Sequence: 17 - CGUGUAUUUGACAAGCUGAGUUUGACACU - 45
• Evidence: experimental ; cloned [2]

Mature gga-miR-223-3p

• Accession: MIMAT0001140
• Description: Gallus gallus gga-miR-223-3p mature miRNA
• Sequence: 59 - UGUCAGUUUGUCAAAUACCCCAA - 81
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: