Stem-loop gga-mir-190a

Accession

MI0001224

Description

Gallus gallus gga-mir-190a precursor miRNA

Literature search

3 open access papers mention gga-mir-190a
(3 sentences)

Sequence

9571 reads, 128 reads per million, 5 experiments

ugcaggacucugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaaCUAUAUAUCAAACAUAUUCCUacaguguccugcc
.(((((((.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).))))))).

Structure

u       u     -U                UA     uuau 
 gcaggac cugug  GAUAUGUUUGAUAUAU  GGUug    u
 ||||||| |||||  ||||||||||||||||  |||||     
 cguccug gacaU  UUAUACAAACUAUAUA  UCaac    u
c       u     CC                --     cuaa 

Annotation confidence High

Genome context

chr10: 4206001-4206085 [-]

Mature gga-miR-190a-5p

• Accession: MIMAT0001155
• Description: Gallus gallus gga-miR-190a-5p mature miRNA
• Sequence: 15 - UGAUAUGUUUGAUAUAUUAGGU - 36
• Evidence: experimental ; Illumina [2]

Mature gga-miR-190a-3p

• Accession: MIMAT0026525
• Description: Gallus gallus gga-miR-190a-3p mature miRNA
• Sequence: 52 - CUAUAUAUCAAACAUAUUCCU - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45