miRBase entry: gga-mir-146a

Stem-loop gga-mir-146a


Accession
MI0001235
Description
Gallus gallus gga-mir-146a precursor miRNA
Gene family
MIPF0000103; mir-146

Literature search
19 open access papers mention gga-mir-146a
(63 sentences)

Sequence

113519 reads, 1662 reads per million, 5 experiments
guguauccucagcuuUGAGAACUGAAUUCCAUGGGUUguaauugaauccuuugucagACCCAUGGGGCUCAGUUCUUCAGcuuggauauuucugucuuc
..((((((..((((..(((((((((.(((((((((((.....(((........)))))))))))))).))))))))).)))).))))))..........

Structure
--------gu      uc    uU         A           guaau   auc 
          guaucc  agcu  GAGAACUGA UUCCAUGGGUU     uga   c
          ||||||  ||||  ||||||||| |||||||||||     |||    
          uauagg  ucGA  UUCUUGACU GGGGUACCCAg     acu   u
cuucugucuu      -u    -C         C           -----   guu 


Annotation confidence High
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Genome context
chr13: 7795767-7795865 [-]

Database links

Mature gga-miR-146a-5p

Accession MIMAT0001163
Description Gallus gallus gga-miR-146a-5p mature miRNA
Sequence 16 - UGAGAACUGAAUUCCAUGGGUU - 37
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature gga-miR-146a-3p

Accession MIMAT0026529
Description Gallus gallus gga-miR-146a-3p mature miRNA
Sequence 58 - ACCCAUGGGGCUCAGUUCUUCAG - 80
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None:

  3. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45