miRBase entry: gga-mir-126

Stem-loop gga-mir-126


Accession
MI0001244
Description
Gallus gallus gga-mir-126 precursor miRNA
Gene family
MIPF0000115; mir-126

Literature search
18 open access papers mention gga-mir-126
(95 sentences)

Sequence

1132577 reads, 16166 reads per million, 5 experiments
gcuggugacggccCAUUAUUACUUUUGGUACGCGcugugacacuucaaacUCGUACCGUGAGUAAUAAUGCGCuguggucagca
((((((.(((((.(((((((((((.(((((((.....(((....)))....))))))).))))))))))).))))).)))))).

Structure
-      g     c           U       CGcug   c 
 gcuggu acggc CAUUAUUACUU UGGUACG     uga a
 |||||| ||||| ||||||||||| |||||||     |||  
 cgacug uguCG GUAAUAAUGAG GCCAUGC     acu c
a      g     C           U       -Ucaa   u 


Annotation confidence High
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Genome context
chr17: 8233313-8233396 [-]

Database links

Mature gga-miR-126-5p

Accession MIMAT0003723
Description Gallus gallus gga-miR-126-5p mature miRNA
Sequence 14 - CAUUAUUACUUUUGGUACGCG - 34
Evidence experimental
cloned [2], Northern [2]
Database links
Predicted targets

Mature gga-miR-126-3p

Accession MIMAT0001169
Description Gallus gallus gga-miR-126-3p mature miRNA
Sequence 51 - UCGUACCGUGAGUAAUAAUGCGC - 73
Evidence experimental
cloned [2], Northern [2]
Database links
Predicted targets

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None:

  3. PubMed ID: 16750530
    Identification of microRNAs from different tissues of chicken embryo and adult chicken
    "Xu H, Wang X, Du Z, Li N"
    "FEBS Lett (2006) 580:3610-3616