Stem-loop gga-mir-135a-3

Accession

MI0001264

Description

Gallus gallus gga-mir-135a-3 precursor miRNA

Literature search

8 open access papers mention gga-mir-135a-3
(10 sentences)

Sequence

23755 reads, 262 reads per million, 5 experiments

cccucugcuguggucUAUGGCUUUUUAUUCCUAUGUGAuugcuuuuccuaacucAUGUAGGGCGAAAAGCCAUGGGcuacucaggggagggacucc
((((((.(((((((((((((((((((..((((((((((..............)))))))))).)))))))))))))))))..)).)))))).....

Structure

-----      g  --                 AU          uugcuu 
     cccucu cu  guggucUAUGGCUUUUU  UCCUAUGUGA      u
     |||||| ||  |||||||||||||||||  ||||||||||       
     gggagg ga  caucGGGUACCGAAAAG  GGGAUGUAcu      u
ccuca      g  cu                 -C          caaucc 

Annotation confidence High

Genome context

chr26: 2124003-2124098 [-]

Mature gga-miR-135a-5p

• Accession: MIMAT0001099
• Description: Gallus gallus gga-miR-135a-5p mature miRNA
• Sequence: 16 - UAUGGCUUUUUAUUCCUAUGUGA - 38
• Evidence: experimental ; Illumina [2]

Mature gga-miR-135a-3-3p

• Accession: MIMAT0031038
• Description: Gallus gallus gga-miR-135a-3-3p mature miRNA
• Sequence: 55 - AUGUAGGGCGAAAAGCCAUGGG - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45