Stem-loop sequence gga-mir-205a

AccessionMI0001267 (change log)
DescriptionGallus gallus miR-205a stem-loop
Gene family MIPF0000058; mir-205
Literature search

4 open access papers mention gga-mir-205a
(9 sentences)

Stem-loop 
   ga  -a      ggu   g    c           c        ucucg 
5'   ca  uccaug   ucu uugu cuucauuccac ggagucug     u
     ||  ||||||   ||| |||| ||||||||||| ||||||||     a
3'   gu  agguac   aga aaca gaagugaggug cuuuagac     c
   -a  ag      ---   g    c           a        caauc
Get sequence
Deep sequencing
187 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
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Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr26: 3076070-3076165 [+]
intergenic
Clustered miRNAs
< 10kb from gga-mir-205a
gga-mir-205achr26: 3076070-3076165 [+]
gga-mir-205cchr26: 3076089-3076146 [-]
Database links

Mature sequence gga-miR-205a

Accession MIMAT0001184
Sequence

22 -  

uccuucauuccaccggagucug

 - 43

Get sequence
Deep sequencing185 reads, 5 experiments
Evidence by similarity; MI0000285
Predicted targets

References

1
PMID:15592404 "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution" International Chicken Genome Sequencing Consortium Nature. 432:695-716(2004).