miRBase entry: cbr-mir-70

Stem-loop cbr-mir-70


Accession
MI0001402
Description
Caenorhabditis briggsae cbr-mir-70 precursor miRNA
Gene family
MIPF0000279; mir-70


Sequence

aaaacggauguaucucuaggaacagccaucauguaagacauuucuaacugaaagaugUAAUACGUGAUUGGUGUUCCCAGaguuuaccguuuccuucuuuuauuuuuccaaa
.((((((......((((.((((((.(.((((((((..(((((((.....))..)))))..)))))))).).)))))).))))....))))))....................

Structure
-------------------a      auguau    a      g c        ag     --  u 
                    aaacgg      cucu ggaaca c aucaugua  acauu  uc a
                    ||||||      |||| |||||| | ||||||||  |||||  || a
                    uuugcc      gaGA CCUUGU G UAGUGCAU  Uguag  ag c
aaaccuuuuuauuuucuucc      --auuu    C      G U        AA     aa  u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 4 positions.

Genome context
chrV: 12360146-12360257 [-]

Database links

Mature cbr-miR-70

Accession MIMAT0001300
Description Caenorhabditis briggsae cbr-miR-70 mature miRNA
Sequence 58 - UAAUACGUGAUUGGUGUUCCCAG - 80
Evidence not_experimental

References

  1. PubMed ID: 12672692
    The microRNAs of Caenorhabditis elegans
    "Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, Rhoades MW, Burge CB, Bartel DP"
    "Genes Dev (2003) 17:991-1008