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miRBase |
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Stem-loop sequence cbr-mir-358 |
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Accession | MI0001403 (change log) | |||||
Description | Caenorhabditis briggsae miR-358 stem-loop | |||||
Gene family | MIPF0000226; mir-358 | |||||
Stem-loop |
-------a - -cauu u - ucc a u auaucca 5' cuc cc cggauuga acc cgacu ggauaccaa ug c a ||| || |||||||| ||| ||||| ||||||||| || | 3' gag gg gucuaacu ugg gcuga ccuaugguu ac g c uguuguga c cacau c u -uu a u cuuugcu |
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Confidence |
Annotation confidence: not enough data
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Comments |
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 4 positions. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence cbr-miR-358 |
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Accession | MIMAT0001301 |
Sequence |
63 - caauugguauccuuagucgugg - 84 |
Evidence | by similarity; MI0000757 |
References |
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1 |
PMID:15317971
"Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification"
RNA. 10:1309-1322(2004).
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