miRBase entry: zma-MIR156g

Stem-loop zma-MIR156g


Accession
MI0001458
Description
Zea mays zma-MIR156g precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
51 open access papers mention zma-MIR156g
(363 sentences)

Sequence

126706 reads, 130978 reads per million, 5 experiments
ggcUGACAGAAGAGAGUGAGCACgcaucggccagacugcaucuauauacggcugcuccuggcgaauggauagaugccaaggcgcagcugcuguugcguGCUCACUUCUCUUUCUGUCAGCu
((((((((((((((((((((((((((.((((..................((((((.((((((............))).))).)))))))))).))))))))))).)))).)))))))))))

Structure
           -    -           u    cagacugcaucuauauac      u   -   gaaug 
ggcUGACAGAA GAGA GUGAGCACgca cggc                  ggcugc ccu ggc     g
||||||||||| |||| ||||||||||| ||||                  |||||| ||| |||      
uCGACUGUCUU CUCU CACUCGugcgu gucg                  ucgacg gga ccg     a
           U    U           u    ------------------      c   a   uagau 


Annotation confidence High
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Genome context
chr7: 119411284-119411404 [+]

Database links

Mature zma-miR156g-5p

Accession MIMAT0001353
Description Zea mays zma-miR156g-5p mature miRNA
Sequence 4 - UGACAGAAGAGAGUGAGCAC - 23
Evidence experimental
Illumina [2]
Database links

Mature zma-miR156g-3p

Accession MIMAT0015126
Description Zea mays zma-miR156g-3p mature miRNA
Sequence 99 - GCUCACUUCUCUUUCUGUCAGC - 120
Evidence experimental
Illumina [2]

References

  1. Identifying microRNAs in plant genomes
    "Maher C, Timmermans M, Stein L, Ware D"
    "Proc IEEE CSB (2004) None:718-723

  2. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716