Stem-loop sequence zma-MIR160e

Accession

MI0001479 (change log)

Description

Zea mays miR160e stem-loop

Gene family

MIPF0000032; MIR160

Literature search

21 open access papers mention zma-MIR160e
(73 sentences)

Stem-loop

   a   aa     c    u  c         cu    -        ac 
5'  ggg  uaugc uggc cc uguaugcca  cgca cggcuacc  a
    |||  ||||| |||| || |||||||||  |||| ||||||||  c
3'  ccc  guacg accg gg gcgugcggu  gcgu gccggugg  c
   c   cg     a    u  a         cg    c        cc 

Deep sequencing

1099 reads, 544 reads per million, 145 experiments

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0001479

Mature sequence zma-miR160e

• Accession: MIMAT0001374
• Sequence: 9 - ugccuggcucccuguaugcca - 29
• Deep sequencing: 638 reads, 9 experiments
• Evidence: by similarity; MI0000190

References

1. "Identifying microRNAs in plant genomes" Maher C, Timmermans M, Stein L, Ware D Proc IEEE CSB :718-723(2004).