Stem-loop zma-MIR166e

Accession

MI0001483

Description

Zea mays zma-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

32 open access papers mention zma-MIR166e
(190 sentences)

Sequence

116299 reads, 350283 reads per million, 4 experiments

ggggaauguugucuggcucgaggugcagaaacauacagaucucaucggucuagguucuugucgaucUCGGACCAGGCUUCAUUCCCc
((((((((..((((((.(((((((((((.(((....(((((.....)))))..))).))))..))))))).))))))..))))))))

Structure

        uu      c       --    a   auac     u 
ggggaaug  gucugg ucgaggu  gcag aac    agauc c
||||||||  |||||| |||||||  |||| |||    ||||| a
cCCCUUAC  CGGACC GGCUcua  uguu uug    ucugg u
        UU      A       gc    c   --ga     c 

Annotation confidence Not enough data

Genome context

chr5: 195602244-195602330 [+]

Mature zma-miR166e

• Accession: MIMAT0001378
• Description: Zea mays zma-miR166e mature miRNA
• Sequence: 67 - UCGGACCAGGCUUCAUUCCC - 86
• Evidence: not_experimental

References

1. Identifying microRNAs in plant genomes
   "Maher C, Timmermans M, Stein L, Ware D"
   "Proc IEEE CSB (2004) None:718-723


2. PubMed ID: 15916721
   Identification and characterization of new plant microRNAs using EST analysis
   "Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA"
   "Cell Res (2005) 15:336-360