Stem-loop oar-mir-127

Accession

MI0001521

Description

Ovis aries oar-mir-127 precursor miRNA

Literature search

10 open access papers mention oar-mir-127
(28 sentences)

Sequence

4617 reads, 684 reads per million, 13 experiments

gcuuugaucacugucuccagccugcugaagcucagagggcucugauucagaaagaucAUCGGAUCCGUCUGAGCUUGGCUggucggaagucuccucaucugcuuccuucggguu
................((((((.....(((((((((.((.((((((((.....))..)))))).)).)))))))))))))))..((((((..........))))))........

Structure

----------------gcuuugaucacugucu      ugcug         g  c      --  a 
                                ccagcc     aagcucaga gg ucugau  uc g
                                ||||||     ||||||||| || ||||||  || a
                                ggUCGG     UUCGAGUCU CC AGGCUA  ag a
uugggcuuccuucgucuacuccucugaaggcu      -----         G  U      cu  a 

Annotation confidence Not enough data

Genome context

chr18: 64385295-64385408 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from oar-mir-127

Mature oar-miR-127

• Accession: MIMAT0001415
• Description: Ovis aries oar-miR-127 mature miRNA
• Sequence: 58 - AUCGGAUCCGUCUGAGCUUGGCU - 80
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 15854907
   RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus
   "Davis E, Caiment F, Tordoir X, Cavaille J, Ferguson-Smith A, Cockett N, Georges M, Charlier C"
   "Curr Biol (2005) 15:743-749