miRBase entry: oar-mir-432

Stem-loop oar-mir-432


Accession
MI0001522
Description
Ovis aries oar-mir-432 precursor miRNA
Gene family
MIPF0000211; mir-432

Literature search
6 open access papers mention oar-mir-432
(28 sentences)

Sequence

383 reads, 107 reads per million, 12 experiments
gcaugacuccuccaagUCUUGGAGUAGGUCAUUGGGUGGauccuuuauuucccuaugugggccacuggauggcuccuccaugucuuggcg
...........(((((.(.(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).).)))))..

Structure
gcaugacuccu     U U     UA       G     a   uu   uu 
           ccaag C UGGAG  GGUCAUU GGUGG ucc  uau  c
           ||||| | |||||  ||||||| ||||| |||  |||   
           gguuc g accuc  ucgguag ucacc ggg  gua  c
---------gc     u u     -c       g     -   -u   uc 


Annotation confidence Not enough data
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Genome context
chr18: 64386792-64386881 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from oar-mir-432
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-432

Accession MIMAT0001416
Description Ovis aries oar-miR-432 mature miRNA
Sequence 17 - UCUUGGAGUAGGUCAUUGGGUGG - 39
Evidence experimental
PCR [1]

References

  1. PubMed ID: 15854907
    RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus
    "Davis E, Caiment F, Tordoir X, Cavaille J, Ferguson-Smith A, Cockett N, Georges M, Charlier C"
    "Curr Biol (2005) 15:743-749