miRBase entry: sbi-MIR156d

Stem-loop sbi-MIR156d


Accession
MI0001548
Description
Sorghum bicolor sbi-MIR156d precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
8 open access papers mention sbi-MIR156d
(23 sentences)

Sequence

uggaccucuggagugagugaUGACAGAAGAGAGAGAGCACAacccagcaccagcgaggagaagccucgcuucugcgagggccgugugcucucugcucucacugucaucgccgacaggccacccaa
(((.(((.....((..((((((((((.((((((((((((((.(((.(((..(((((((.....)))))))..)))..)))...)))))))))).))))..))))))))))..)))))))).....

Structure
-----   a   cugga  ga          -A    -          --a   -a   cc       a 
     ugg ccu     gu  gugaUGACAG  AGAG AGAGAGCACA   ccc  gca  agcgagg g
     ||| |||     ||  ||||||||||  |||| ||||||||||   |||  |||  ||||||| a
     acc gga     ca  cgcuacuguc  ucuc ucucucgugu   ggg  cgu  ucgcucc a
aaccc   -   -----  gc          ac    g          gcc   ag   cu       g 


Annotation confidence Not enough data
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Genome context
chr2: 62805800-62805924 [-]

Database links

Mature sbi-miR156d

Accession MIMAT0001444
Description Sorghum bicolor sbi-miR156d mature miRNA
Sequence 21 - UGACAGAAGAGAGAGAGCACA - 41
Evidence not_experimental

References

  1. Conservation and divergence of microRNA families in plants
    "Dezulian T, Palatnik JF, Huson DH, Weigel D"
    Genome Biol. (2005) 6:P13