miRBase entry: sbi-MIR167d

Stem-loop sbi-MIR167d


Accession
MI0001551
Description
Sorghum bicolor sbi-MIR167d precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
3 open access papers mention sbi-MIR167d
(8 sentences)

Sequence

guggugcauccucuaguagcUGAAGCUGCCAGCAUGAUCUGaugaggugagguuuauuugcuaguuggucacaggcuaacagcaugauggcccaacaaaucaacgaucagaucaugcugugcaguuucaucugcucguggaugcacau
...((((((((.(.(((((.(((((((((((((((((((((((((..((.((((....((((.(((((((...)))))))))))....))))...))..)))....))))))))))))).))))))))).))))).).))))))))..

Structure
gug        u u     c         -             ----   gg  --a    uauu    a       a 
   gugcaucc c aguag UGAAGCUGC CAGCAUGAUCUGa    uga  ug   gguu    ugcu guugguc  
   |||||||| | ||||| ||||||||| |||||||||||||    |||  ||   ||||    |||| ||||||| c
   cacguagg g ucguc acuuugacg gucguacuagacu    acu  ac   ccgg    acga caaucgg  
-ua        u c     u         u             agca   aa  aac    uagu    -       a 


Annotation confidence Not enough data
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Genome context
chr2: 4980559-4980706 [-]

Database links

Mature sbi-miR167d

Accession MIMAT0001447
Description Sorghum bicolor sbi-miR167d mature miRNA
Sequence 21 - UGAAGCUGCCAGCAUGAUCUG - 41
Evidence not_experimental

References

  1. Conservation and divergence of microRNA families in plants
    "Dezulian T, Palatnik JF, Huson DH, Weigel D"
    Genome Biol. (2005) 6:P13