miRBase entry: ame-mir-277

Stem-loop ame-mir-277


Accession
MI0001585
Description
Apis mellifera ame-mir-277 precursor miRNA
Gene family
MIPF0000156; mir-277

Literature search
3 open access papers mention ame-mir-277
(5 sentences)

Sequence

ggcaguuggggcucgugccagaugcgcguuuacacgggcccugaauacugUAAAUGCACUAUCUGGUACGACAucucuccuguc
(((((..((((.((((((((((((.(((((((((.(...........)))))))))).).)))))))))))..))))..)))))

Structure
     uu    -c           - c         c ggcc 
ggcag  gggg  ucgugccagau g gcguuuaca g    c
|||||  ||||  ||||||||||| | ||||||||| |    u
cuguc  cucu  AGCAUGGUCUA C CGUAAAUgu c    g
     cu    AC           U A         - auaa 


Annotation confidence Not enough data
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Genome context
CM000058.5: 6958025-6958108 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ame-mir-277
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-277-3p

Accession MIMAT0001481
Description Apis mellifera ame-miR-277-3p mature miRNA
Sequence 51 - UAAAUGCACUAUCUGGUACGACA - 73
Evidence experimental
RTPCR [1], Illumina [2-3]

References

  1. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  2. PubMed ID: 20491979
    Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee
    "Behura SK, Whitfield CW"
    "Insect Mol Biol (2010) 19:431-439

  3. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226