miRBase entry: cfa-mir-429

Stem-loop cfa-mir-429


Accession
MI0001644
Description
Canis familiaris cfa-mir-429 precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

agccugcugaugggcgucuuaccagacacgguuagaucuggguucuggugucUAAUACUGUCUGGUAAUGCCGUucauccauggc
.(((....((((((((.(((((((((((..(((((((((((...)))).)))))))..)))))))))).).))))))))...)))

Structure
a   ugcu        u -          cg       -    g 
 gcc    gaugggcg c uuaccagaca  guuagau cugg  
 |||    |||||||| | ||||||||||  ||||||| |||| u
 cgg    cuacuUGC G AAUGGUCUGU  UAAUcug gguc  
-   -uac        C U          CA       u    u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Xie et al. [1] refer to this sequence by the internal identifier MIR201. The sequence is unrelated to mouse mir-201 (MIR:MI0000244).

Genome context
chr5: 56370509-56370593 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cfa-mir-429
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-429

Accession MIMAT0001539
Description Canis familiaris cfa-miR-429 mature miRNA
Sequence 53 - UAAUACUGUCUGGUAAUGCCGU - 74
Evidence experimental
cloned [1]

References

  1. PubMed ID: 15735639
    Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
    "Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M"
    "Nature (2005) 434:338-345