Stem-loop sequence osa-MIR435

AccessionMI0001687 (change log)
DescriptionOryza sativa miR435 stem-loop
Literature search

4 open access papers mention osa-MIR435
(6 sentences)

Stem-loop 
   u    ----ccu    aaa      ccagcag   u   gcg     -  -          gcuuca   - u 
5'  ucca       uccc   aacucc       acc gga   aaaau ug ccuugaauua      gac c a
    ||||       ||||   ||||||       ||| |||   ||||| || ||||||||||      ||| |  
3'  aggu       aggg   uugagg       ugg ccu   uuuug ac gggauuugau      cug g u
   c    uaaaagu    -ag      ----uua   -   --a     u  a          -aguug   u a
Get sequence
Deep sequencing
140 reads, 50 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MSU7) Overlapping transcripts
Chr3: 18209450-18209581 [+]
intergenic
Database links

Mature sequence osa-miR435

Accession MIMAT0001585
Previous IDsosa-MIR435
Sequence

97 -  

uuauccgguauuggaguuga

 - 116

Get sequence
Deep sequencing137 reads, 2 experiments
Evidence experimental; cloned [1]
Database links

References

1
PMID:15805478 "Cloning and characterization of microRNAs from rice" Sunkar R, Girke T, Jain PK, Zhu JK Plant Cell. 17:1397-1411(2005).