miRBase entry: osa-MIR439e

Stem-loop osa-MIR439e

Accession

MI0001695

Description

Oryza sativa osa-MIR439e precursor miRNA

Literature search

2 open access papers mention osa-MIR439e
(2 sentences)

Sequence

71 reads, 49 reads per million, 2 experiments

ccaccuacccugucgaacugacgcaguucgacauguaccugucgaacugugguuguucgauagguaucccUGUCGAACCGCGGUUGUUCGAcagggug
.....(((((((((((((...(((.((((((((.(((((((((((((.......)))))))))))))...)))))))).)))...)))))))))))))

Structure

ccacc             uga   a        --u             ug 
     uacccugucgaac   cgc guucgaca   guaccugucgaac  u
     |||||||||||||   ||| ||||||||   |||||||||||||  g
     gugggacAGCUUG   GCG CAAGCUGU   uauggauagcuug  g
-----             UUG   C        ccc             uu

Annotation confidence Low

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Genome context

Chr8: 15057569-15057666 [-]

Database links

References

PubMed ID: 15805478
Cloning and characterization of microRNAs from rice
"Sunkar R, Girke T, Jain PK, Zhu JK"
"Plant Cell (2005) 17:1397-1411