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miRBase |
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Stem-loop sequence zma-MIR156j |
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Accession | MI0001808 (change log) | ||||
Description | Zea mays miR156j stem-loop | ||||
Gene family | MIPF0000008; MIR156 | ||||
Literature search |
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52 open access papers mention zma-MIR156j | ||||
Stem-loop |
-- a a cg a -a - --a -a cc a 5' cg gugg ccu gg gcgaugacag agag agagagcaca ccc gca agcgagg a || |||| ||| || |||||||||| |||| |||||||||| ||| ||| ||||||| a 3' gc cacc gga cc cgcuacuguc ucuc ucucucgugu ggg cgu ucgcucc a aa - - ca - ac g gcc ag cu g |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR156j-5p |
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Accession | MIMAT0001710 |
Previous IDs | zma-miR156j |
Sequence |
21 - ugacagaagagagagagcaca - 41 |
Deep sequencing | 136439 reads, 201 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Mature sequence zma-miR156j-3p |
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Accession | MIMAT0015175 |
Previous IDs | zma-miR156j* |
Sequence |
86 - ugcucucugcucucacugucauc - 108 |
Deep sequencing | 235 reads, 113 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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