miRBase entry: dre-let-7h

Stem-loop dre-let-7h

Accession

MI0001875

Description

Danio rerio dre-let-7h precursor miRNA

Literature search

39 open access papers mention dre-let-7h
(201 sentences)

Sequence

5897 reads, 434 reads per million, 11 experiments

gaguuggcuguguuguggUGAGGUAGUAAGUUGUGUUGUUguuggggaucaguauaguauggcccuugaaggagauaacuauacaauuuacugccuuccauaaugcagacucuc
((((...(((((((((((.(((((((((((((((((.((((((((((.(((........))))))).......)))))).))))))))))))))))))))))))))))))))..

Structure

--    ugg           U                 U      -------    a   gua 
  gagu   cuguguugugg GAGGUAGUAAGUUGUGU GUUguu       gggg uca   u
  ||||   ||||||||||| ||||||||||||||||| ||||||       |||| |||    
  cuca   gacguaauacc uuccgucauuuaacaua caauag       uccc ggu   a
cu    ---           -                 u      aggaagu    -   aug

Annotation confidence Not enough data

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Genome context

chr23: 28536665-28536778 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dre-let-7h

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dre-let-7h

Accession	MIMAT0001766
Description	Danio rerio dre-let-7h mature miRNA
Sequence	19 - UGAGGUAGUAAGUUGUGUUGUU - 40
Evidence	experimental cloned [1]
Database links
Predicted targets

References

PubMed ID: 15937218
The developmental miRNA profiles of zebrafish as determined by small RNA cloning
"Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
"Genes Dev (2005) 19:1288-1293