Accession
MI0001916
Description
Danio rerio
dre-mir-23a-3 precursor miRNA
Gene family
MIPF0000027;
mir-23
Literature search
11 open access papers mention dre-mir-23a-3
(212 sentences)
(212 sentences)
Sequence
16570
reads,
2673
reads per million, 11 experiments
ccagcuggagGGAUUCCUGGCAGAGUGAUUUgggauuauaucauaaaAUCACAUUGCCAGGGAUUUCCAaccagcugu
.(((((((.((((((((((((((.(((((((..(((...)))...))))))).))))))))))))))...))))))).
.(((((((.((((((((((((((.(((((((..(((...)))...))))))).))))))))))))))...))))))).
Structure
c --a A -gg u cagcugg gGGAUUCCUGGCAG GUGAUUU gau ||||||| |||||||||||||| ||||||| ||| a gucgacc CUUUAGGGACCGUU CACUAaa cua u aAC A aua u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2: 33900435-33900512 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-23a-3
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-23a-3p
| Accession | MIMAT0001790 |
| Description | Danio rerio dre-miR-23a-3p mature miRNA |
| Sequence | 48 - AUCACAUUGCCAGGGAUUUCCA - 69 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-23a-3-5p
| Accession | MIMAT0031945 |
| Description | Danio rerio dre-miR-23a-3-5p mature miRNA |
| Sequence | 11 - GGAUUCCUGGCAGAGUGAUUU - 31 |
| Evidence | not_experimental |
| Database links |
|
References
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