miRBase entry: dre-mir-26b

Stem-loop dre-mir-26b


Accession
MI0001927
Description
Danio rerio dre-mir-26b precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
6 open access papers mention dre-mir-26b
(11 sentences)

Sequence

49707 reads, 3014 reads per million, 11 experiments
gcauuuggccuuugccuggUUCAAGUAAUCCAGGAUAGGUUaguucccacuaguacggccuauucuugguuacuuguuucaggaggaggcuacgagc
((.(.((((((((.(((((..(((((((((.(((((((((((((....)))).....))))))))).)))))))))..))))).)))))))).).))

Structure
  a u        g     UU         C         -----    u 
gc u uggccuuu ccugg  CAAGUAAUC AGGAUAGGU     Uagu c
|| | |||||||| |||||  ||||||||| |||||||||     ||||  
cg g aucggagg ggacu  guucauugg ucuuauccg     auca c
  a c        a     uu         u         gcaug    c 


Annotation confidence High
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Genome context
chr23: 24675207-24675303 [-]

Database links

Mature dre-miR-26b

Accession MIMAT0001795
Description Danio rerio dre-miR-26b mature miRNA
Sequence 20 - UUCAAGUAAUCCAGGAUAGGUU - 41
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293