Accession
MI0001929
Description
Danio rerio
dre-mir-27b precursor miRNA mir-27
Gene
family?
family?
RF00644;
mir-27
Literature search
9 open access papers mention dre-mir-27b
(126 sentences)
(126 sentences)
Sequence
92964
reads,
5932
reads per million, 11 experiments
ucuuuucuagcaggugcAGAGCUUAGCUGAUUGGUGAACAgugauugaacucuuugUUCACAGUGGCUAAGUUCUGCAucugaggagagga
((((((((..((((((((((((((((((.((((.(((((((.((......)).))))))))))))))))))))))))))))).))))))))
((((((((..((((((((((((((((((.((((.(((((((.((......)).))))))))))))))))))))))))))))).))))))))
Structure
ag G G u uu
ucuuuucu caggugcAGAGCUUAGCU AUUG UGAACAg ga g
|||||||| |||||||||||||||||| |||| ||||||| ||
aggagagg gucuACGUCUUGAAUCGG UGAC ACUUguu cu a
-a - - u ca
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr8: 30167435-30167525 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-27b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-27b-3p
| Accession | MIMAT0001797 |
| Description | Danio rerio dre-miR-27b-3p mature miRNA |
| Sequence | 57 - UUCACAGUGGCUAAGUUCUGCA - 78 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-27b-5p
| Accession | MIMAT0031950 |
| Description | Danio rerio dre-miR-27b-5p mature miRNA |
| Sequence | 18 - AGAGCUUAGCUGAUUGGUGAACA - 40 |
| Evidence | not_experimental |
| Database links |
|
References
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