miRBase entry: dre-mir-124-1

Stem-loop dre-mir-124-1


Accession
MI0001966
Description
Danio rerio dre-mir-124-1 precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
23 open access papers mention dre-mir-124-1
(79 sentences)

Sequence

4236 reads, 281 reads per million, 7 experiments
ggcucucgcuguacguguucacaguggaccuugauuuauuguauuucaauUAAGGCACGCGGUGAAUGCCAAcagcacagcc
((((...(((((..((((((((.(((..((((((((...........))))))))..))).))))))))..)))))..))))

Structure
    cuc     ac        a   ga        uauu 
ggcu   gcugu  guguucac gug  ccuugauu    g
||||   |||||  |||||||| |||  ||||||||    u
ccga   cgacA  CGUAAGUG CGC  GGAAUuaa    a
    -ca     AC        G   AC        cuuu 


Annotation confidence Not enough data
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Genome context
chr2: 26645317-26645398 [-]

Database links

Mature dre-miR-124-3p

Accession MIMAT0001819
Description Danio rerio dre-miR-124-3p mature miRNA
Sequence 51 - UAAGGCACGCGGUGAAUGCCAA - 72
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293