miRBase entry: dre-mir-137-2

Stem-loop dre-mir-137-2


Accession
MI0002001
Description
Danio rerio dre-mir-137-2 precursor miRNA
Gene family
MIPF0000106; mir-137

Literature search
6 open access papers mention dre-mir-137-2
(110 sentences)

Sequence

3399 reads, 217 reads per million, 8 experiments
guucuguuguuucccucuauaaaggacucucuucggugACGGGUAUUCUUGGGUGGAUAAUAcggcucucguugUUAUUGCUUAAGAAUACGCGUAgucgaggagagucaugucggcggcgagagagc
(((((.(((((.((..(.......((((((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..))))))))))))..)..)).))))).)))))

Structure
     g     u  cu uauaaag            ug   G             G      -  g 
guucu uuguu cc  c       gacucucuucgg  ACG GUAUUCUUGGGUG AUAAUA cg c
||||| ||||| ||  |       ||||||||||||  ||| ||||||||||||| |||||| || u
cgaga agcgg gg  g       cugagaggagcu  UGC CAUAAGAAUUCGU UAUUgu gc c
     g     c  cu -----ua            gA   G             -      u  u 


Annotation confidence High
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Genome context
chr24: 30352608-30352735 [+]

Database links

Mature dre-miR-137-3p

Accession MIMAT0001834
Description Danio rerio dre-miR-137-3p mature miRNA
Sequence 75 - UUAUUGCUUAAGAAUACGCGUA - 96
Evidence experimental
cloned [1]
Database links
Predicted targets

Mature dre-miR-137-5p

Accession MIMAT0031972
Description Danio rerio dre-miR-137-5p mature miRNA
Sequence 39 - ACGGGUAUUCUUGGGUGGAUAAUA - 62
Evidence not_experimental

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293