Accession
MI0002010
Description
Danio rerio
dre-mir-145 precursor miRNA
Literature search
10 open access papers mention dre-mir-145
(186 sentences)
(186 sentences)
Sequence
3446
reads,
505
reads per million, 11 experiments
ucagucuucaucauuuccucauccccgggGUCCAGUUUUCCCAGGAAUCCCuugggcaaucgaaagggGGAUUCCUGGAAAUACUGUUCUugggguuggggcuggacuacuga
(((((..((..((...(((((.((((((((..((((.((.(((((((((((((...(....)...))))))))))))).)).)))).)))))))).))))).))))..)))))
(((((..((..((...(((((.((((((((..((((.((.(((((((((((((...(....)...))))))))))))).)).)))).)))))))).))))).))))..)))))
Structure
cu au uuu u UC U C ggg a
ucagu uc ca ccuca ccccgggG CAGU UU CCAGGAAUCCCuu c a
||||| || || ||||| |||||||| |||| || ||||||||||||| |
aguca ag gu ggggu gggguUCU GUCA AA GGUCCUUAGGggg g u
uc -- --c u -U U A aaa c
Annotation confidence
Medium
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Genome context
chr14: 38743941-38744053 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dre-mir-145
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-145-5p
| Accession | MIMAT0001842 |
| Description | Danio rerio dre-miR-145-5p mature miRNA |
| Sequence | 30 - GUCCAGUUUUCCCAGGAAUCCC - 51 |
| Evidence |
experimental
cloned [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-145-3p
| Accession | MIMAT0031976 |
| Description | Danio rerio dre-miR-145-3p mature miRNA |
| Sequence | 69 - GGAUUCCUGGAAAUACUGUUCU - 90 |
| Evidence | not_experimental |
| Database links |
|
References
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