miRBase entry: dre-mir-150

Stem-loop dre-mir-150


Accession
MI0002016
Description
Danio rerio dre-mir-150 precursor miRNA
Gene family
MIPF0000197; mir-150

Literature search
6 open access papers mention dre-mir-150
(91 sentences)

Sequence

928 reads, 61 reads per million, 11 experiments
caucuccgucUCUCCCAAUCCUUGUACCAGUGucugauuuacagaugacgcuggacgggguuuggggggggcugaggga
..((((.(((((((((((.((((((.((((((((............)))))))))))))).))))))))))).))))..

Structure
ca    c           U      A        ugauu 
  ucuc gucUCUCCCAA CCUUGU CCAGUGuc     u
  |||| ||||||||||| |||||| ||||||||      
  ggag cgggggggguu ggggca ggucgcag     a
ag    u           u      -        uagac 


Annotation confidence Not enough data
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Genome context
chr3: 32571309-32571387 [+]

Database links

Mature dre-miR-150

Accession MIMAT0001846
Description Danio rerio dre-miR-150 mature miRNA
Sequence 11 - UCUCCCAAUCCUUGUACCAGUG - 32
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293