miRBase entry: dre-mir-184-1

Stem-loop dre-mir-184-1


Accession
MI0002026
Description
Danio rerio dre-mir-184-1 precursor miRNA
Gene family
MIPF0000059; mir-184

Literature search
5 open access papers mention dre-mir-184-1
(106 sentences)

Sequence

224039 reads, 15693 reads per million, 11 experiments
gucgaacacgucuccuuaucacuuuuccagcccagcuauccauuuaguauucguUGGACGGAGAACUGAUAAGGGCaugugcccgau
((((..(((((.(((((((((.((((((.(.(((((................))))).))))))).))))))))).)))))..))))

Structure
    aa     c         c      a c     uauccau 
gucg  cacgu uccuuauca uuuucc g ccagc       u
||||  ||||| ||||||||| |||||| | |||||        
uagc  gugua GGGAAUAGU AAGAGG C GGUug       u
    cc     C         C      - A     cuuauga 


Annotation confidence High
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Genome context
chr18: 26203303-26203389 [-]

Database links

Mature dre-miR-184

Accession MIMAT0001853
Description Danio rerio dre-miR-184 mature miRNA
Sequence 55 - UGGACGGAGAACUGAUAAGGGC - 76
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293