Stem-loop dre-mir-375-2

Accession

MI0002073

Description

Danio rerio dre-mir-375-2 precursor miRNA mir-375

Gene
family

RF00700; mir-375

Literature search

8 open access papers mention dre-mir-375-2
(80 sentences)

Sequence

361482 reads, 488.0 reads per million, 268 experiments

uguacuugucucACGUUGAGCCACACGCACAAUGCcugcagaugaaaggguUUUGUUCGUUCGGCUCGCGUUAcgcagaugca
((((.((((...((((.(((((..(((.((((.((((..........)))).)))).)))..)))))))))...)))).))))

Structure

    c    cuc    U     AC   C    U    gcag 
ugua uugu   ACGU GAGCC  ACG ACAA GCcu    a
|||| ||||   |||| |||||  ||| |||| ||||     
acgu gacg   UGCG CUCGG  UGC UGUU uggg    u
    a    cAU    -     CU   U    U    aaag 

Annotation confidence High

Genome context

chr9: 11571973-11572055 [-]

Mature dre-miR-375-2-5p

• Accession: MIMAT0052780
• Description: Danio rerio dre-miR-375-2-5p mature miRNA
• Sequence: 13 - ACGUUGAGCCACACGCACAAUGC - 35
• Evidence: experimental ; cloned [1]

Mature dre-miR-375-3p

• Accession: MIMAT0001876
• Description: Danio rerio dre-miR-375-3p mature miRNA
• Sequence: 52 - UUUGUUCGUUCGGCUCGCGUUA - 73
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293