miRBase entry: dre-mir-375-2

Stem-loop dre-mir-375-2


Accession
MI0002073
Description
Danio rerio dre-mir-375-2 precursor miRNA
Gene family
MIPF0000114; mir-375

Literature search
8 open access papers mention dre-mir-375-2
(81 sentences)

Sequence

9927 reads, 633 reads per million, 11 experiments
uguacuugucucacguugagccacacgcacaaugccugcagaugaaaggguUUUGUUCGUUCGGCUCGCGUUAcgcagaugca
((((.((((...((((.(((((..(((.((((.((((..........)))).)))).)))..)))))))))...)))).))))

Structure
    c    cuc    u     ac   c    u    gcag 
ugua uugu   acgu gagcc  acg acaa gccu    a
|||| ||||   |||| |||||  ||| |||| ||||     
acgu gacg   UGCG CUCGG  UGC UGUU uggg    u
    a    cAU    -     CU   U    U    aaag 


Annotation confidence Not enough data
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Genome context
chr9: 11571973-11572055 [-]

Database links

Mature dre-miR-375

Accession MIMAT0001876
Description Danio rerio dre-miR-375 mature miRNA
Sequence 52 - UUUGUUCGUUCGGCUCGCGUUA - 73
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293