Accession
MI0002077
Description
Danio rerio
dre-mir-455-1 precursor miRNA mir-455
Gene
family?
family?
RF00709;
mir-455
Literature search
1 open access papers mention dre-mir-455-1
(1 sentences)
(1 sentences)
Sequence
3897
reads,
288
reads per million, 11 experiments
ucccuggugugagggUAUGUGCCCUUGGACUACAUCGuggaagccagcaccAUGCAGUCCAUGGGCAUAUACACuugccucaaggccuagaucuuc
...(((((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).))......
...(((((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..))).))......
Structure
---ucc - -g ----- U A C gaa
cu ggu ugagg gUAUGUGCCC UGGACU CAU Gug g
|| ||| ||||| |||||||||| |||||| ||| |||
ga ccg acucc CAUAUACGGG ACCUGA GUA cac c
cuucua u ga guuCA U C c gac
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
The mir-455 precursor was predicted computationally and a mature product verified in human by Northern blot [2]. The precise sequence termini of the mature form were derived by cloning from human and rat samples (Landgraf and Tuschl, unpublished).
Genome context
chr5: 65250379-65250474 [-]
Database links
Mature dre-miR-455-5p
| Accession | MIMAT0001879 |
| Description | Danio rerio dre-miR-455-5p mature miRNA |
| Sequence | 16 - UAUGUGCCCUUGGACUACAUCG - 37 |
| Evidence | not_experimental |
| Database links |
|
| Predicted targets |
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Mature dre-miR-455-3p
| Accession | MIMAT0031993 |
| Description | Danio rerio dre-miR-455-3p mature miRNA |
| Sequence | 52 - AUGCAGUCCAUGGGCAUAUACAC - 74 |
| Evidence | not_experimental |
References
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