Stem-loop sequence ptc-MIR160h

AccessionMI0002208 (change log)
DescriptionPopulus trichocarpa miR160h stem-loop
Gene family MIPF0000032; MIR160
Literature search

6 open access papers mention ptc-MIR160h
(22 sentences)

Stem-loop 
   ga  c u      c      cc           ug -aua  u    aga 
5'   uc c gugugc uggcuc  ugcaugccauu  c    gc cauc   a
     || | |||||| ||||||  |||||||||||  |    || ||||    
3'   ag g cguacg acugag  acgugcgguag  g    cg gugg   c
   --  u u      u      ca           gu guuc  -    cug
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000352.2: 6921900-6921997 [-]
intergenic
Database links

Mature sequence ptc-miR160h

Accession MIMAT0001914
Sequence

11 -  

ugccuggcucccugcaugcca

 - 31

Get sequence
Evidence by similarity; MI0002202

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).
2
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).