Stem-loop sequence ptc-MIR166l

AccessionMI0002229 (change log)
DescriptionPopulus trichocarpa miR166l stem-loop
Gene family MIPF0000004; MIR166
Literature search

6 open access papers mention ptc-MIR166l
(23 sentences)

Stem-loop 
   uaacuu   u  u     uu         a   -    --gc     ca 
5'       uug gg gaaug  gucugguuc agg caug    cacca  u
         ||| || |||||  ||||||||| ||| ||||    |||||  c
3'       aac cc cuuac  cggaccagg ucc guau    guggu  u
   -uaauu   u  c     uu         c   u    auaa     uc
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000351.2: 541777-541873 [-]
intergenic
Database links

Mature sequence ptc-miR166l

Accession MIMAT0001935
Sequence

68 -  

ucggaccaggcuucauucccc

 - 88

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Evidence by similarity; MI0000199

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).