Stem-loop sequence ptc-MIR169ae

AccessionMI0002250 (change log)
DescriptionPopulus trichocarpa miR169ae stem-loop
Gene family MIPF0000012; MIR169_1
Literature search

9 open access papers mention ptc-MIR169ae
(12 sentences)

Stem-loop 
   cu    u g         ac a        cc    ucuuaguu  -     aua 
5'   uguu g uagccaagg  g cuugccca  acca        gg gucca   u
     |||| | |||||||||  | ||||||||  ||||        || |||||   a
3'   acag c aucgguucc  c gaacgggu  uggu        cc cgggu   u
   --    u g         -a -        uu    -uuaccuu  a     cau
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000346.2: 7227918-7228024 [+]
intergenic
Database links

Mature sequence ptc-miR169ae

Accession MIMAT0001956
Sequence

10 -  

uagccaaggacgacuugccca

 - 30

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Evidence by similarity; MI0000212

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).