Stem-loop sequence ptc-MIR169c

AccessionMI0002253 (change log)
DescriptionPopulus trichocarpa miR169c stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

9 open access papers mention ptc-MIR169c
(12 sentences)

Stem-loop 
   aaguuu    c         u           -g c   a     g  u  a 
5'       gaug agccaagga gacuugccgac  a uca uuuuu cu cc u
         |||| ||||||||| |||||||||||  | ||| ||||| || ||  
3'       uuac ucgguuccu uuggacgguug  u agu gagaa ga gg a
   --ccuu    a         u           ga a   a     -  u  u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000355.2: 4971659-4971760 [-]
intergenic
Database links

Mature sequence ptc-miR169c

Accession MIMAT0001959
Sequence

11 -  

cagccaaggaugacuugccga

 - 31

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Evidence by similarity; MI0000976

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).