Stem-loop sequence ptc-MIR169d

AccessionMI0002254 (change log)
DescriptionPopulus trichocarpa miR169d stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

9 open access papers mention ptc-MIR169d
(12 sentences)

Stem-loop 
   gag       c         ug          auuuccuc        c     cg 
5'    ucgaaug agccaagga  acuugccggc        cuaaguag gagcc  g
      ||||||| |||||||||  ||||||||||        |||||||| |||||   
3'    gguuuau ucgguuccu  ugggcggccg        gguuuauc uucgg  c
   --u       a         gu          gcccgcac        -     aa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000342.2: 5569290-5569400 [-]
intergenic
Database links

Mature sequence ptc-miR169d

Accession MIMAT0001960
Sequence

11 -  

cagccaaggaugacuugccgg

 - 31

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Evidence by similarity; MI0000212

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).