Stem-loop sequence ptc-MIR169t

AccessionMI0002270 (change log)
DescriptionPopulus trichocarpa miR169t stem-loop
Gene family MIPF0000253; MIR169_3
Literature search

9 open access papers mention ptc-MIR169t
(12 sentences)

Stem-loop 
   c      cc          ug     c   caggcuagcauuugcuagcuacag 
5'  uagagu  gagccaagaa  acuug cgg                        g
    ||||||  ||||||||||  ||||| |||                         
3'  guuuca  cucgguucuu  uggac gcc                        g
   -      -u          gu     c   uuacagugaaaucguauguagaac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000342.2: 5556636-5556743 [-]
intergenic
Database links

Mature sequence ptc-miR169t

Accession MIMAT0001976
Sequence

10 -  

gagccaagaaugacuugccgg

 - 30

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Evidence by similarity; MI0000976

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).