Stem-loop sequence ptc-MIR169z

AccessionMI0002276 (change log)
DescriptionPopulus trichocarpa miR169z stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

9 open access papers mention ptc-MIR169z
(12 sentences)

Stem-loop 
   uagua     c         ug         --c   ------------    agca   -       
5'      gaaug agccaagaa  auuugccgg   gcc            ggcc    cuu guugca 
        ||||| |||||||||  |||||||||   |||            ||||    ||| ||||| a
3'      uuuac ucgguucuu  ugaacggcc   cgg            ucgg    gaa caacga 
   --agg     a         gu         cca   uuuuuguaaacu    gaac   u
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Confidence Annotation confidence: not enough data
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Database links

Mature sequence ptc-miR169z

Accession MIMAT0001982
Sequence

11 -  

cagccaagaaugauuugccgg

 - 31

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Evidence by similarity; MI0000976

References

1
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).