Stem-loop sequence ptc-MIR319i

AccessionMI0002304 (change log)
DescriptionPopulus trichocarpa miR319i stem-loop
Gene family MIPF0001104; MIR319
Literature search

8 open access papers mention ptc-MIR319i
(30 sentences)

Stem-loop 
   gu c    a   ag       c     u   -----     u   ag 
5'   g agaa ugg  guuccuu cagcc caa     gcauc uua  a
     | |||| |||  ||||||| ||||| |||     ||||| |||   
3'   c ucuu acc  cgaggga gucgg guu     uguag ggu  u
   -u u    a   cu       a     -   uuauc     c   gg
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000342.2: 24889057-24889145 [+]
intergenic
Database links

Mature sequence ptc-miR319i

Accession MIMAT0002010
Sequence

61 -  

uugggcugaagggagcuccc

 - 80

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Evidence by similarity; MI0002296

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).
2
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).