Stem-loop sequence ptc-MIR474c

Accession

MI0002360 (change log)

Description

Populus trichocarpa miR474c stem-loop

Literature search

1 open access papers mention ptc-MIR474c
(1 sentences)

Stem-loop

   gaca  aa     c          ccug auu  ggu 
5'     gu  agcua auccaauagu    g   cu   c
       ||  ||||| ||||||||||    |   ||    
3'     cg  ucggu uggguugucg    c   ga   a
   ucga  gg     u          aaaa -gu  aua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Poptr2_0; GCA_000002775.2): CM000349.2: 13134940-13135014 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0002360

Mature sequence ptc-miR474c

• Accession: MIMAT0002066
• Sequence: 47 - caaaagcuguuggguuuggcuggg - 70
• Evidence: by similarity; MI0002358

References

1. PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).