Stem-loop sequence ptc-MIR478e

AccessionMI0002374 (change log)
DescriptionPopulus trichocarpa miR478e stem-loop
Gene family MIPF0000052; MIR478
Literature search

1 open access papers mention ptc-MIR478e
(1 sentences)

Stem-loop 
   -g   cu              cg  caucauauuu     g   gg 
5'   agu  ucuaucuuuaagaa  ga          cucgu aau  u
     |||  ||||||||||||||  ||          ||||| |||   
3'   uca  agauagggauuuuu  cu          gagca uua  c
   ga   -c              au  -------ucu     g   au
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000338.2: 18713054-18713138 [+]
intergenic
Database links

Mature sequence ptc-miR478e

Accession MIMAT0002080
Sequence

52 -  

ugacgagucuucuauuuuuaggga

 - 75

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Evidence by similarity; MI0002373

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).