Stem-loop sequence ptc-MIR478r

AccessionMI0002386 (change log)
DescriptionPopulus trichocarpa miR478r stem-loop
Gene family MIPF0000052; MIR478
Literature search

1 open access papers mention ptc-MIR478r
(1 sentences)

Stem-loop 
   a   u     uuug   -   -  a  uc 
5'  guc ccuag    agg gac ug ua  a
    ||| |||||    ||| ||| || ||  u
3'  cag ggauu    ucc cug gc au  u
   c   -     uuua   u   u  a  uu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000337.2: 44456408-44456465 [+]
intergenic
Database links

Mature sequence ptc-miR478r

Accession MIMAT0002092
Sequence

33 -  

uaacgugucuccuauuuuuaggga

 - 56

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Evidence by similarity; MI0002370

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).