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miRBase |
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Stem-loop sequence ssc-mir-106a |
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Accession | MI0002412 (change log) | |||||||||||||
Description | Sus scrofa miR-106a stem-loop | |||||||||||||
Gene family | MIPF0000001; mir-17 | |||||||||||||
Literature search |
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12 open access papers mention ssc-mir-106a | |||||||||||||
Stem-loop |
u cc - a g g c u 5' cc ugg guguaa aagugcuu ca ugcag uag uu u || ||| |||||| |||||||| || ||||| ||| || u 3' gg acc uacauu uucacgaa gu acguc auc ag g u au c c a - u a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence ssc-miR-106a |
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Accession | MIMAT0002118 |
Sequence |
13 - aaaagugcuuacagugcagguagc - 36 |
Deep sequencing | 628 reads, 15 experiments |
Evidence | experimental; Illumina [2-3] |
References |
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1 |
PMID:15885146
"Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing"
BMC Genomics. 6:70(2005).
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2 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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3 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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