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miRBase |
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Stem-loop sequence ssc-mir-217-1 |
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Accession | MI0002425 (change log) | |||||
Previous IDs | ssc-mir-217 | |||||
Description | Sus scrofa miR-217-1 stem-loop | |||||
Gene family | MIPF0000077; mir-217 | |||||
Literature search |
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3 open access papers mention ssc-mir-217-1 | |||||
Stem-loop |
auaauuauuacaga uu c c a c c u - aag 5' guuu gaugu g ag ua ugcau aggaacugau g gau a |||| ||||| | || || ||||| |||||||||| | ||| 3' caaa cuacg c uc gu acgua uucuugacua c cug a -----------gaa -u a u c u a c a guu |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence ssc-miR-217 |
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Accession | MIMAT0002131 |
Sequence |
32 - uacugcaucaggaacugauuggau - 55 |
Deep sequencing | 448 reads, 13 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:15885146
"Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing"
BMC Genomics. 6:70(2005).
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2 |
PMID:19196471
"Cloning, characterization and expression analysis of porcine microRNAs"
BMC Genomics. 10:65(2009).
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3 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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