Accession
MI0002425
Description
Sus scrofa
ssc-mir-217-1 precursor miRNA
Literature search
3 open access papers mention ssc-mir-217-1
(10 sentences)
(10 sentences)
Sequence
17
reads,
39
reads per million, 9 experiments
auaauuauuacagaguuuuugaugucgcagaUACUGCAUCAGGAACUGAUUGGAUaagaauuggucaccaucaguucuuaaugcauugccuucagcaucuaaacaag
..............((((..(((((.(.((.((.(((((.((((((((((.((((........))).).)))))))))).))))).)).)).).))))).))))...
..............((((..(((((.(.((.((.(((((.((((((((((.((((........))).).)))))))))).))))).)).)).).))))).))))...
Structure
auaauuauuacaga uu c c a C C U - aag
guuu gaugu g ag UA UGCAU AGGAACUGAU G GAU a
|||| ||||| | || || ||||| |||||||||| | |||
caaa cuacg c uc gu acgua uucuugacua c cug a
-----------gaa -u a u c u a c a guu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr3: 90065707-90065813 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-217-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-217
| Accession | MIMAT0002131 |
| Description | Sus scrofa ssc-miR-217 mature miRNA |
| Sequence | 32 - UACUGCAUCAGGAACUGAUUGGAU - 55 |
| Evidence |
experimental
Illumina [1] |
References
|
