miRBase entry: age-mir-30b

Stem-loop age-mir-30b


Accession
MI0002507
Description
Ateles geoffroyi age-mir-30b precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

accgaguuucaguucaUGUAAACAUCCUACACUCAGCuguaauacauggauuggcugagagguggauguuuacuucagcugacuugga
.(((((..((((((...((((((((((.((.((((((((............))))))))..))))))))))))...))))))))))).

Structure
a     uu      caU          U  -A        uaaua 
 ccgag  ucaguu   GUAAACAUCC AC  CUCAGCug     c
 |||||  ||||||   |||||||||| ||  ||||||||      
 gguuc  agucga   cauuuguagg ug  gagucggu     a
a     --      cuu          -  ga        uaggu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature age-miR-30b

Accession MIMAT0002218
Description Ateles geoffroyi age-miR-30b mature miRNA
Sequence 17 - UGUAAACAUCCUACACUCAGC - 37
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24