miRBase entry: mne-mir-130a

Stem-loop mne-mir-130a


Accession
MI0002526
Description
Macaca nemestrina mne-mir-130a precursor miRNA
Gene family
MIPF0000034; mir-130


Sequence

ugcugcuggccagagcucuuuucacauugugcuacugucugcaccugucacuagCAGUGCAAUGUUAAAAGGGCauuggccguguagug
.((((((((((((.((((((((.((((((((((.(((...((....))...))).)))))))))).)))))))).))))))).))))).

Structure
u     -       a        c          a   ucu  a 
 gcugc uggccag gcucuuuu acauugugcu cug   gc c
 ||||| ||||||| |||||||| |||||||||| |||   ||  
 ugaug gccgguu CGGGAAAA UGUAACGUGA gau   ug c
g     u       a        U          C   cac  u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-130a

Accession MIMAT0002237
Description Macaca nemestrina mne-miR-130a mature miRNA
Sequence 55 - CAGUGCAAUGUUAAAAGGGC - 74
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24