Stem-loop ggo-mir-153

Accession

MI0002567

Description

Gorilla gorilla ggo-mir-153 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

agcgguggccagugucauuuuugugauguugcagcuaguaauaugagcccagUUGCAUAGUCACAAAAGUGAucauuggaaacugug
.(((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))).

Structure

a     gg      -             gu       -a  aa 
 gcggu  ccagug ucauuuuugugau  ugcagcu  gu  u
 |||||  |||||| |||||||||||||  |||||||  ||  a
 uguca  gguuac AGUGAAAACACUG  ACGUUga  cg  u
g     aa      u             AU       cc  ag 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr7: 157377179-157377265 [-]

Mature ggo-miR-153

• Accession: MIMAT0002274
• Description: Gorilla gorilla ggo-miR-153 mature miRNA
• Sequence: 53 - UUGCAUAGUCACAAAAGUGA - 72
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24