Stem-loop mml-mir-125b-2

Accession

MI0002579

Description

Macaca mulatta mml-mir-125b-2 precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

1 open access papers mention mml-mir-125b-2
(35 sentences)

Sequence

646698 reads, 3929 reads per million, 9 experiments

accagacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguauuuuaguaacaucACAAGUCAGGCUCUUGGGACCUaggcggagggga
.((...((((.(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).)))).)).

Structure

a  aga    u     -    U    C   A        g  auu 
 cc   cuuu ccuag UCCC GAGA CCU ACUUGUGA gu   u
 ||   |||| ||||| |||| |||| ||| |||||||| ||   u
 gg   gagg ggaUC AGGG UUCU GGA UGAACAcu ca   a
a  --g    c     C    -    C   C        a  aug 

Annotation confidence High

Genome context

chr3: 31021387-31021475 [-]

Mature mml-miR-125b-5p

• Accession: MIMAT0002225
• Description: Macaca mulatta mml-miR-125b-5p mature miRNA
• Sequence: 17 - UCCCUGAGACCCUAACUUGUGA - 38
• Evidence: experimental ; cloned [1], Illumina [3]

Mature mml-miR-125b-2-3p

• Accession: MIMAT0031073
• Description: Macaca mulatta mml-miR-125b-2-3p mature miRNA
• Sequence: 56 - ACAAGUCAGGCUCUUGGGACCU - 77
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 15345052
   Microarray analysis of microRNA expression in the developing mammalian brain
   Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P, Constantine-Paton M, Horvitz HR
   Genome Biol (2004) 5:R68


2. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45