miRBase entry: mne-mir-188

Stem-loop mne-mir-188


Accession
MI0002611
Description
Macaca nemestrina mne-mir-188 precursor miRNA
Gene family
MIPF0000113; mir-188


Sequence

ugcucccucucucaCAUCCCUUGCAUGGUGGAGGGUgagcuuuaugaaaaccccucccacaugcaggguuugcaggauggugagcc
.((((((..(((..((..(((((((((..((((((....(.....).....))))))..)))))))))..))..))).)).)))).

Structure
u    -  uc   ca  UC         GU      -Ugag u 
 gcuc cc  ucu  CA  CCUUGCAUG  GGAGGG     c u
 |||| ||  |||  ||  |||||||||  ||||||     | u
 cgag gg  agg  gu  gggacguac  ccuccc     g a
c    u  -u   ac  uu         ac      caaaa u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-188

Accession MIMAT0002310
Description Macaca nemestrina mne-miR-188 mature miRNA
Sequence 15 - CAUCCCUUGCAUGGUGGAGGGU - 36
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24